- Public Health Research and Emergency Management Directorate
- Public Health Case Team
- Nutrition Case Team
- Environmental & Occupational Health Case Team
- Public Health Emergency Management (PHEM) Case Team
- Laboratory Research, Diagnostics and Quality Assurance Directorate
- Medical Microbiology Case Team
- Entomology Case Team
- Biochemistry Case Team
- Parasitology Case Team
- Immunohematology and Pathology Case Team
- Quality Assurance Case Team
- Research Monitoring, Training and Publication Directorate
- Research Monitoring Case Team
- Capacity Building Case Team
- Publication, Knowledge Translation (KT) and Dissemination Case Team
- Biomedical Research and Technology Transfer Directorate
- Molecular Biology Case Team
- Traditional and Modern Medicine Case Team
- Biotechnology Case Team
- Human Resource Directorate
- Finance, Procurement and Property Directorate
- Planning, Budget, Monitoring and Evaluation Directorate
- Public Relations Office
- Gender Office
- Internal Audit Office